Dr. Shuvra Kanti Dey
Dr. Shuvra Kanti Dey Professor, Department of Microbiology

PROFILE


SHORT BIOGRAPHY

NA

RESEARCH INTEREST

Molecular Epidemiology, Virology, Public Health, Clinical Microbiolgy

JOURNAL PAPER

  1. Dey SK, Mariya KS, Modhusudon S, Razoanul H, Okitsu S, Ushijima H. 2018. Intragenogroup recombination in the complete genome sequence of human sapovirus circulating in Bangladesh. Genome Announc. 2018 May 3;6(18).
  2. Dey SK, Phathammavong O, Nguyen TD, Thongprachum A, Chan-It W, Okitsu S, Mizuguchi M, Ushijima H. Seasonal pattern and genotype distribution of sapovirus infection in Japan, 2003-2009. Epidemiol Infect. 2012 Jan;140(1):74-7.
  3. Dey SK, Hayakawa Y, Rahman M, Islam R, Mizuguchi M, Okitsu S, Ushijima H. 2009. G2 strain of rotavirus among infants and children, Bangladesh. Emerg Infect Dis, 15(1): 91-94.
  4. Dey SK, Phathammavong O, Okitsu S, Mizuguchi M, Ohta Y, Ushijima H. 2010. Seasonal pattern and genotype distribution of norovirus infection in Japan. Pediatr Infect Dis J. 29(5):e32-4.
  5. Dey SK, Nguyen TA, Phan TG, Nishio O, Salim AF, Rahman M, Yagyu F, Okitsu S, Ushijima H. Molecular and epidemiological trend of norovirus associated gastroenteritis in Dhaka City, Bangladesh . J Clin Virol, 40(3): 218-223, November 2007.
  6. Dey SK, Phan TG, Mizuguchi M, Okitsu S, Ushijima H. 2011.Genetic diversity and emergence of norovirus GII/4-2006b in Japan during 2006-2007. Clin Lab, 57(3-4):193-9.
  7. Dey SK, Phan TG, Mizuguchia M, Okitsua S, Ushijima H. 2010. Novel recombinant norovirus in Japan. Virus Genes, 40(3):362-4.
  8. Dey SK, Phathammavong O, Nguyen TD, Thongprachum A, Chan-It W, Okitsu S, Mizuguchi M, Ushijima H. 2012. Seasonal pattern and genotype distribution of sapovirus infection in Japan, 2003-2009. Epidemiol Infect.140(1):74-7.
  9. Dey SK, Phan TG, Nguyen TA, Nishio O, Salim AF, Yagyu F, Okitsu S, Ushijima H. Prevalence of sapovirus infection among infants and children with acute gastroenteritis in Dhaka City, Bangladesh during 2004-2005. J Med Virol, 79(5):633-638, May 2007.
  10. Dey SK, Shimizu H, Phan TG, Hayakawa Y, Islam A, Salim AF, Khan AR, Mizuguchi M, Okitsu S, Ushijima H. 2009. Molecular epidemiology of adenovirus infection among infants and children with acute gastroenteritis in Dhaka City, Bangladesh. Infect Genet Evolution, 9(4):518-522.
  11. Dey SK, Islam A, Mizuguchi M, Okitsu S, Ushijima H. Epidemiological and molecular analysis of astrovirus gastroenteritis in Dhaka City, Bangladesh. J Trop Pediatr, 54(6):423-425, December 2008.
  12. Dey SK, Mizuguchi M, Okitsu S, Ushijima H. 2011. Novel recombinant sapovirus in Bangladesh, Clin Lab, 57(1-2): 91-4.
  13. Dey SK, Phan TG, Nishimura S, Mizuguchi M, Okitsu S, Ushijima H. 2009. Molecular and epidemiological trend of sapovirus, and astrovirus infection in Japan. J Trop Pediatr. 56(3):205-7.
  14. Dey SK, Thongprachum A, Islam AR, Phan TG, Rahman M, Mizuguchi M, Okitsu S, Ushijima H. 2009. Molecular analysis of G3 rotavirus among infants and children in Dhaka City, Bangladesh after 1993. Infect Genet Evolution, 9(5): 983-986.
  15. Dey SK, Ushijima H, Phathammavong O, Chanit W, Okitsu S, Mizuguchi M, Ohta Y. 2010. Seasonal trend and serotype distribution of rotavirus infection in Japan, 1981-2008. Pediatr Infect Dis J, 29(2):166-7.
  16. Dey SK, Thongprachum A, Ohta Y, Phan TG, Nishimura S, Mizuguchi M, Okitsu S, Ushijima H. 2009. Molecular and epidemiological trend of rotavirus infection among infants and children in Japan. Infect Genet Evol, 9(5): 955-961.
  17. Dey SK, I Hoq, Satoshi H, Okitsu S, Ushijima H. 2012. The prevalence, seasonality, peak age of infection of enteric adenoviruses in Japan. Epidemiol Infect. 2013 May;141(5):958-60.
  18. Dey SK. Shamsun N, Tanzina A, Hoomyra S, Farjana A, Anjuman A, Firoz A, Ali T. 2014. A retrospective analysis of viral gastroenteritis in Asia. The Journal of pediatric Infectious Diseases, 9:53-65.
  19. Dey SK, T Fujimoto, H Ushijima. 2011. Adenovirus Diarrhea: Types, Diagnosis and Treatments. In: Advances in Medicine and Biology (Leon V. Berhardt) Volume 38, pp. 275-286. Nova Science Publishers, Inc, NY, USA.
  20. Dey SK, S Okitsu, H Ushijima. 2011. Diarheal Viruses: Classificiation, Morphology, Genome Organization, Molecular Detection, Treatment In: Diarrhea: Causes, Types and Treatments, Public health in the 21st Century, (Hannah M. Wilson), pp. 71-96, Nova Science Publishers, Inc, NY, USA.
  21. Dey SK, Zahan N, Afrose S, Islam T, Sahjahan M, Saha S, Mahmud SI,  Talukder AA. Mizuguchi M, Ushijima H. 2014. Molecular Epidemiology of HIV in Asia. hiv & aids review, 13(2): 33-39.
  22. Dey SK, I Hoq, Satoshi H, Okitsu S, Ushijima H. 2012. Comparison of Immunochromatoghraphy, PCR and culture methods for the detection of Campylobacte. J Microbiol Methods. 2012 Dec; 91(3) :566-8.
  23. Dey SK, I Hoq, Satoshi H, Okitsu S, Ushijima H. 2012. Comparison of Immunochromatoghraphy, PCR and culture methods for the detection of Campylobacte. J Microbiol Methods, 91(3): 566-8.
  24. Dey SK, Jody ML, Paola AC, Steve CR, Debabrata B. 2010. Growth and survival of Lactobacillus and Bifidobacterium in milk with or without linoleic acid. International Journal of Probiotics and prebiotics. Vol. 7, No. 3/4, pp. 109-112, 2012.
  25. Shaha M, Hadisur Rahman M, Jahan M, Dey SK, Das KC, Hashem A, Salimullah M. Identification of a novel tri-genotypic recombinant Hepatitis B virus in Bangladesh. Virus Res. 2018 Aug 15;255:154-156.
  26. Shaha M, Sarker PK, Hossain MS, Das KC, Jahan M, Dey SK, Tabassum S, Hashem A, Salimullah M. Analysis of the complete genome of hepatitis B virus subgenotype C2 isolate NHB17965 from a HBV infected patient. Version 3. F1000Res. 2018 Jul 9.
  27. Uddin J, Hossain K, Hossain S, Saha K, Jubyda FT, Haque R, Billah B, Talukder AA, Parvez AK, Dey SK. 2019. Bacteriological assessments of foodborne pathogens in poultry meat at different super shops in Dhaka, Bangladesh. Ital J Food Saf. 2019 Mar 26;8(1):6720.
  28. Matsushima Y, Shimizu H, Kano A, Nakajima E, Ishimaru Y, Dey SK, Watanabe Y, Adachi F, Suzuki K, Mitani K, Fujimoto T, Phan TG. 2012. The unique features of a novel species human adenovirus D associated with acute gastroenteritis. Genome Announc. 2013 Jan;1(1).
  29. Matsushima Y, Shimizu H, Kano A, Nakajima E, Ishimaru Y, Dey SK, Watanabe Y, Adachi F, Suzuki K, Mitani K, Fujimoto T, Phan TG, Ushijima H. 2012. Emerg Infect Dis. 2012 May;18(5):846-8.
  30. Chan-it W, Thongprachum A, Dey SK, Phan TG, Khamrin P, Okitsu S, Nishimura S, Kobayashi M, Kikuta H, Baba T, Yamamoto A, Sugita K, Hashira S, Tajima T, Ishida S, Mizuguchi M, Ushijima H. 2011. Detection and genetic characterization of rotavirus infections in non-hospitalized children with acute gastroenteritis in Japan, 2007-2009. Infect Genet Evol, 11(2): 415-22.
  31. Pham NT, Trinh QD, Khamrin P, Nguyen TA, Dey SK, Phan TG, Hoang le P, Maneekarn N, Okitsu S, Mizuguchi M, Ushijima H. Sequence analysis of the capsid gene of Aichi viruses detected from Japan, Bangladesh, Thailand, and Vietnam. J Med Virol, 80(7):1222-1227, July 2008.
  32. Phan TG, Khamrin P, Trinh QD, Dey SK, Takanashi S, Okitsu S, Maneekarn N, Ushijima H. Detection and genetic characterization of group A rotavirus strains circulating among children with acute gastroenteritis in Japan. J Virol, 81(9):4645-4653, May 2007.
  33. Phan TG, Khamrin P, Trinh DQ, Dey SK, Yagyu F, Okitsu S, Nishio O, Ushijima H. Genetic characterization of group A rotavirus strains circulating among children with gastroenteritis in Japan in 2004-2005. Infect Genet Evol, 7(2):247-253, July 2007.
  34. Pham NT, Khamrin P, Nguyen TA, Dey SK, Phan TG, Okitsu S, Ushijima H. Isolation and molecular characterization of Aichi viruses from fecal specimens collected in Japan, Bangladesh, Thailand, and Vietnam. J Clin Microbiol, 45(7):2287-2288, Jul 2007.
  35.  Phan TG, Yan H, Khamrin P, Trinh QD, Dey SK, Yagyu F, Okitsu S, Muller WE, Ushijima H. Novel intragenotype recombinant sapovirus in Japan. Clin Lab, 52(7-8):363-366, 2006.
  36. Phan TG, Khamrin P, Trinh QD, Dey SK, Takanashi S, Okitsu S, Maneekarn N, Ushijima H. Emergence of intragenotype recombinant sapovirus in Japan. Infect Genet Evol, 7(4):542-546, March 2007.
  37. Khamrin P, Dey SK, Chan-It W, Thongprachum A, Satou K, Okitsu S, Maneekarn N, Ushijima H. 2009. Evaluation of a Rapid Immunochromatography Strip Test for Detection of Astrovirus in Stool Specimens. J Trop Pediatr, 56(2):129-31.
  38. Pham NT, Trinh QD, Nguyen TA, Dey SK, Phan TG, Hoang LP, Khamrin P, Maneekarn N, Okitsu S, Mizuguchi M, Ushijima H. 2009. Development of genotype-specific primers for differentiation of genotypes A and B of Aichi viruses. J Virol Methods, 156(1-2):107-110.
  39. Ali Azm Talukder, Md. Moniruzzam, taslin Jahan Mou, Dey SK. 2014. Drug resistance pattern of common enteropathogenic bacteria responsible for diarrheal diseases in buffalo calves in Bangladesh. Bangladesh journal of Medical Sciences. 20(1), 2014.
  40. AKMF Mahmud, Rahman KMZ, Dey SK, Islam T, Talukder AZ. 2014. Genome Annotation and Comparative Genomics of ORF Virus. Advances in Microbiology, 4, 1117-1131.
  41. Roni MSiddiqa A Tuli JF Barman NKDey SKAdnan N Yamada M,  Talukder AA. 2017. Inexpensive Procedure for Measurement of Ethanol: Application to Bioethanol Production Process. Advances in Microbiology. Vol.7 No.11, November 2017.
  42. Tahsina I Diba F, Miah R,  Siddiqa A, Azmuda N, Nahar SAdnan N,  Dey SKTalukder AA. 2017. Optimization of Acetic Acid Production Rate by Thermotolerant Acetobacter spp. Advances in Microbiology. Vol.7 No.11, November 2017.
  43. Razoanul H, Mariya KS, Najmuj S, Omar SS, Tanjir TIS, Saddam H, Anisul I, Dey SK. 2017. Selective antimicrobial activity of Jambul (Syzygium cumini) fruit extract on enteric pathogenic bacteria. Advances in Microbiology, 7(3).
  44. Ushijima H, Suichi N, Aksara T, Yuko SO, Dinh NT, Ngan TKP, Sayaka T, Dey SK, Shoko O, Wataru Y, Masashi M, Satoshi H. 2014. Sensitive and rapid detection of Campylobacter species from stools of diarrheal children in Japan by LAMP method. Japanese Journal of Infectious Diseases, 67, 374–378.

 



CONFERENCE PAPER

  1. Dey SK, Sifat SF, Almamun M, Hossain K, Mou TJ,  Marzan M,  Parvez AK. Molecular and genetic characterization of rotavirus strains among infants and children with acute gastroenteritis in Bangladesh. asm microbe 2018, June 7-11, Atlanta, USA.
  2. Dey SK, Siddique TT, Hoque R,  Sakib N, Sarkar OS, Uddin J, Jubaida FJ, Saha K. Molecular and epidemiological trend of rotavirus infection among infants and children with acute gastroenteritis in Bangladesh. 12th International Single Stranded RNA virus Symposium, 6-10 October, 2015, Goa, India.
  3. Almario JA, Dey SK, Biswas D. Determination of efficacy and role of egg-yolk antibody (IgY) against Salmonella colonization in chicken cells. 26 th Annual symposium at Dept. of Animal and avian sciences, University of Maryland, College Park, May 30, 2012.
  4. Dey SK, Okitsu S, H Ushijima. Prevalence and development of Immunochromatography test for Campylobacter in diarrheal stool samples in Japan. 86th Annual conference of The Japanese Society for Infectious Diseases. April 2011, Tokyo, Japan.
  5. Dey SK, Shimizu H, Okitsu S, Ushijima H. Complete genome sequence and phylogenetic analysis of three Japanese Sapovirus isolates. 58th Annual Conference of Japanese Society for Virology. November 2010. Tokushima, Japan.
  6. Dey SK, Nishimura S, H Ushijima. Immunochromatography test for Campylobacter in diarrheal stool samples.International Conference on Campylobacter, February 2011, Kobe, Japan.
  7. Dey SK, Shimizu H, Okitsu S, Ushijima H. Seasonal pattern of norovirus and rotavirus infection in Japan. The 43rd Annual Meeting of the Japanese Society for Pediatric Infectious Diseases, October 2010. Fukoshima, Japan.
  8. Dey SK, Shimizu H, Okitsu S, Ushijima H.Seasonal pattern and genotype distribution of rotavirus infection in Japan. The 42nd Annual Meeting of the Japanese Society for Pediatric Infectious Diseases, November 2010. Fukoi, Japan.
  9. Dey SK, Shimizu H, Okitsu S, Ushijima H. Novel recombinant sapovirus in Bangladesh. 57th Annual Conference of Japanese Society for Virology. October 2009. Tokyo, Japan.
  10. Dey SK, Ichida S, Ushijima H. Vaccine for rotavirus and other diarrheal organisms. Pediatric Academic Societies and Asian Society for Pediatric Research Joint Meeting. Invited speech, May 2008, Honolulu, Hawaii, USA.
  11. Dey SK, Phan TG, Yagyu F, Okitsu S, Ushijima H. Gastroenteris in Dhaka City, Bangladesh during 2004 to 2005. 2nd Congress of Asian Society for Pediatric Research. December 2006, Yokohama, Japan.
  12. Dey SK, Shimizu H, Okitsu S, Ushijima H. Molecular epidemiology of rare adenovirus infection amonh infants and children with acute gastroenteritis in Dhaka City, Bangladesh. 55th Annual Conference of Japanese Society for Virology. October 2007. Sapporo, Japan.
  13. Dey SK, Phan TG, Nguyen TA, Yagyu F, Okitsu S, Ushijima H Sapovirus infection among infants and children with acute gastroenteritis in Dhaka City, Bangladesh. 54th Annual Conference of Japanese Society for Virology. November 2006, Nagoya, Japan.
  14. Dey SK, Quang TD, Okitsu S, Ushijima H. Molecular epidemiology of viral gastroenteritis in Dhaka City, Bangladesh. 80th Annual Conference of Japanese Association for infectious diseases. April 2006, Yokoyama, Japan.
  15. Dey SK, Phan TG, Nguyen TA, Takanashi S, Yagyu F, Okitsu S, Ushijima H. Molecular and epidemiological trend of norovirus associated gastroenteritis in Dhaka City, Bangladesh. 34th Conference of Tropical Medicine and Health. P-175, October 2006, Nagasaki, Japan.
  16. Ushijima H, Khamrin P, Nguyen TA, TG Phan, Takanashi S, Dey SK, Chanit W, Thongprachum, Okitsu S, Maneekarn N. Molecular epidemiology of rotavirus in Asia.10th International Symposium on dsRNA viruses. P-56, June 2009, Australia.
  17. Ushijima H, Dey SK, Phan TG, Nguyen TA, Khamrin P, Takanashi S, Okitsu S, Maneekarn N. Molecular epidemiology of norovirus infection in Asia, 14th International congress of Virology. VOP, P-11, August 2008, Istanbul.
  18. Ushijima H, Ichida S, Dey SK. Vaccine for diarrheal viruses. Pediatric Academic Societies and Asian Society for Pediatric Research Joint Meeting. Invited speech, May 2008, Honolulu, Hawaii, USA.
  19. Ushijima H, Dey SK, Phan TG, Khamrin P, Nguyen TA, Okitsu S. Viral Gastroenteritis in Asia. The 14th International symposium on health-related water microbiology. Key note speech, September 2007, Tokyo, Japan.
  20. Ushijima H, Phan TG, Khamrin P, Dey SK, Quang TD, Takanashi S, Yan H, Okitsu S. Detection and molecular epidemiology of diarrheal viruses in Japan and Asia. 2nd Congress of Asian Society for Pediatric Research. December 2006, Yokohama, Japan.
  21. Khamrin P, Dey SK, Quang TD, Takanashi S, Okitsu S. Ushijima H. Animal-origins of unusual rotavirus strains circulating in Asia. 2010. The 3rd International workshop on rotavirus vaccine in China.
  22. Ushijima H, Phan TG, Khamrin P, Dey SK, Quang TD, Takanashi S, Yan H, Okitsu S, Maneekarn N. Molecular Epidemiology of Rotavirus in Asia. 2010. The 3rd International workshop on rotavirus vaccine in China.
  23. Okitsu S, Nguyen TA, Dey SK, Khamrin P, Ushijima H. Evaluation of the immunochromatrography test for rapid detection of norovitus antigen in stool samples. XIV International congress of Virology. August 2008, Istambul, Turkey.
  24. Quang TD, Dey SK, Ushijima H. Amino acid substitution in VP7 sequences of human rotavirus A serotype G1 strains isolated in Japan, China, Thailand and Vietnam in 2002-2003. 80 th Annual conference for the Japanese Association for Infectious Diseases. April 2006, Tokyo, Japan.
  25. Pham N, Khamrin P, Tuan N, Dey SK, Phan TG, Okitsu S, Ushijima H. Isolation and molecular characterization of the Aichi viruses from fecal specimens collected in Japan, Bangladesh, Thailand and Vietnam. 54th Annual Conference of Japanese Society for Virology. November 2006, Nagoya, Japan.

 


OTHER



Academic Info

Institute: University of Dhaka

BSC (HONS) in Microbiology

Institute: University of Dhaka

MS in Microbiology

Institute: The University of Tokyo, Tokyo, Japan
Period: 2005-2007

MPH

Institute: The University of Tokyo, Tokyo, Japan
Period: 2007-1010

PhD

Institute: The University of Maryland at College Park, MD, USA

Postdoctoral Fellow

Experience

Organization: The University of Tokyo, Tokyo, Japan
Position: TA
Period: 2008-2010
Organization: Nihon University, Tokyo, Japan
Position: JSPS Postdoctoral Fellow
Period: 2010-2011
Organization: The University of Maryland at College Park, MD, USA
Position: Postdoctoral Fellow
Period: 2012

Contact

Dr. Shuvra Kanti Dey

Professor
Department of Microbiology
Jahangirnagar University, Savar, Dhaka-1342, Bangladesh.
Email: shuvra.dey@juniv.edu , shuvradey@yahoo.com